QuanLG

hello, I use manta to analysis a WGS sample to detect cnv,I find my output.vcf is too many results even **FILTER==PASS** line. If I can filter by QUAL == 999...

stringtie analyze bam of STAR

1

HI,gpertea. Histat2 can add XS tag for all read alignments,I have a stranded library (fr-firststrand) data, I use STAR to mapping genome and set options --outSAMstrandField intronMotif which can add...