Lollipop plots

[shhabnsbwjd]

Hi

I created nice lollipop plot using maftools. The issue is I facing difficulty creating a scale on Y-axis.

Here is my code:

lollipopPlot(
  maf = laml,
  gene = 'KLF4',
  AACol = 'aaChange',pointSize = 2,
  showMutationRate = FALSE, showDomainLabel = TRUE, 
  labelPos = 409, showLegend = TRUE, labPosSize = 0.7, domainLabelSize = 0.5,
  legendTxtSize = 0.8, axisTextSize = c(1,1), defaultYaxis = FALSE, 
  printCount = TRUE)

I am attaching the created plot

[PoisonAlien]

Hi, I cant seem to reproducde the issue. What version of the package are you using? Could you please post the sessionInfo?

[shhabnsbwjd]

Hi

Here is the session info()

> sessionInfo()
R version 4.3.1 (2023-06-16 ucrt)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 19045)

Matrix products: default


locale:
[1] LC_COLLATE=English_United Kingdom.utf8  LC_CTYPE=English_United Kingdom.utf8   
[3] LC_MONETARY=English_United Kingdom.utf8 LC_NUMERIC=C                           
[5] LC_TIME=English_United Kingdom.utf8    

time zone: Europe/London
tzcode source: internal

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] maftools_2.16.0

loaded via a namespace (and not attached):
 [1] vctrs_0.6.3        cli_3.6.1          rlang_1.1.1        generics_0.1.3    
 [5] data.table_1.14.8  glue_1.6.2         colorspace_2.1-0   scales_1.2.1      
 [9] fansi_1.0.4        grid_4.3.1         munsell_0.5.0      tibble_3.2.1      
[13] lifecycle_1.0.4    DNAcopy_1.74.1     compiler_4.3.1     dplyr_1.1.3       
[17] RColorBrewer_1.1-3 pkgconfig_2.0.3    rstudioapi_0.15.0  lattice_0.21-8    
[21] R6_2.5.1           tidyselect_1.2.0   utf8_1.2.3         pillar_1.9.0      
[25] splines_4.3.1      magrittr_2.0.3     Matrix_1.6-1       tools_4.3.1       
[29] gtable_0.3.4       survival_3.5-7     ggplot2_3.4.3   

[PoisonAlien]

Could you please update the package (current version is >2.18) and try again?

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[github-actions[bot]]

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