Eli

icon location Biologist in the process of learning in Bioinformatics.

Results 2 issues of Eli

Performing integration on datasets normalized with SCTransform or not?

6 comment

Hi, I'm analyzing a dataset that has two conditions (Normal and Tumor). I'm using vignette integration. In this case it is better to use normalization sctransform or not? I tried...

single_cell_analysis_complete_class.ipynb

Hi @mousepixels I'm trying to read this GEO dataset (GSE198896) and I can't load it using Scanpy's adata function. The file in CSV format is not provided. In this case,...