pei jiawei

SNPs that passed the filters: 0

5

Hello, when I tried to convert VCF format( [Uploading timetree_1.vcf.gz…]() ) to Phylip format using vcf2phylip, all the SNPs was not preserved. This data is 9 samples extracted from a...

TypeError: not all arguments converted during string formatting

6

Dear author when I use xpclr like this : > xpclr --out ./chr1.txt --format vcf --input /home/maize/vcf/merge_1.filter.vcf --samplesA /home/maize/pop/pop_TEM_7.txt --samplesB /home/maize/pop/pop_parviglumis.txt --map ../../map/chr1.MT.map.distance --chr 1 --gdistkey None --phased --size 1000...