Paola88
Paola88
Hi, I have found a similar issue. I'm trying ti follow the tutorial on raw reads. I have shotgun sequencing. I arrived in the tutorial at this poin: P13. dbcan_utils...
Not yet, really. I have used metaeuk for genes prediction. Could be this the problem? Il Lun 1 Lug 2024, 11:11 powerby66 ***@***.***> ha scritto: > Hi, I have found...
Thank you, i have another question. I have used MetaEuk gor genes prediction, consequently i have to generate file.ffn with bedtools, what file is better to use? The output of...
Thank you for your answer. If i humderstand i have to do the steps p5 and after p9 in the tutorial, is it right? Il Lun 1 Lug 2024, 16:45...
Sorry for the question, bit if I don't generate files.ffn how can I estimate abundance, if i hunderstand, i need the depth file. Thank you Il Lun 1 Lug 2024,...
Hi, i have tried as you suggested to me, but i write you another time because it doesn't work. these ar3e my steps: I have shotgun metagenomic data during wine...
Good morning, i have tried to run my data from contigs of megahit avoiding metaeuk step and using file.fna and meta for CAZyme annotation, followed by ffn generation from prodigal...