pbbioconda
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pbmerge - overlapping movie/zmw combination
Using the latest versions of Lima and pbmerge, I'm trying to re-merge samples that were demultiplexed by Lima. But pbmerge is throwing an error that there are overlapping movies/ZMW combinations. I manually checked and there are no overlapping movie/ZMW combinations and of course there shouldn't be because Lima demultiplexed the samples. I think this might be a bug in pbmerge.
Maybe pbmerge has an undocumented requirement that ZMWs are sorted in order?