biobankAccelerometerAnalysis
biobankAccelerometerAnalysis copied to clipboard
OxWearables
Extracting meaningful health information from large accelerometer datasets
I'm getting an error when I attempt to the program with the command: "accProcess test2.csv --csvTimeFormat 'MM/dd/yyyy HH:mm:ss:SSS' --csvTimeXYZTempColsIndex 0,1,2,3" `/opt/homebrew/lib/python3.9/site-packages/numpy/core/fromnumeric.py:3474: RuntimeWarning: Mean of empty slice. return _methods._mean(a, axis=axis, dtype=dtype,...
At the moment, GENEActive devices are reading local time as if they are true unix time, which is incorrect. This will create issues for daylight savings and different time zones....
A first attempt at printing some of the details of processing as part of the summary. Feedback very welcome! (And please don't merge yet, see below for why). TODO: -...
Hi, The following has been tested on Windows 10 with conda 4.10.1
This code is a (slightly messy) addition of a way to return more columns from the empirical cumulative distribution function of the intensity distribution. Bit messy, so feedback is very...
At the moment, it is a bit unclear in terms of how to deal with the GT3X, time zone, day light saving and what parameters to pass in. Related issues...
Good Morning, I'm trying to analyze some CWA files that I collected using Axivity AX6 (https://axivity.com/product/ax6) sensor. Unfortunately, I keep receiving the error that I attached. Any possible solution? Thanks...
``` (home_Env) hangy@NDPH8334 data % accProcess sample_v2.gt3x Traceback (most recent call last): File "/Users/hangy/opt/miniconda3/envs/home_Env/bin/accProcess", line 8, in sys.exit(main()) File "/Users/hangy/opt/miniconda3/envs/home_Env/lib/python3.9/site-packages/accelerometer/accProcess.py", line 297, in main assert os.access(path, os.W_OK), ( AssertionError: Either...
At the moment, the plotting script is a big script clotting together which makes it more cumbersome than ideal to make changes or add features. We need to refactor this...
As part of the DREAMs trial, more circadian rhythm metrics were developed. Will be good to include them for the next release.
Metadata
Owner
Metadata
Extracting meaningful health information from large accelerometer datasets