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output read cluster information

Open gudeqing opened this issue 3 years ago • 0 comments

Hi,@sfchen Is it possible to output read cluster information? Following is my intention:

  • Stat which bases were corrected by genecore.
  • The sequencing error detected by gencore should be highly trusted. And correction detail may provide a solid base ground for modeling sequencing error.
  • The learned model should be a good guider to eliminate or include mutation when evidence such as supporting reads are rare.

Maybe this idea could be incorporated into gencore to further reduce sequencing error when a cluster size is small. Looking forward to your comment. Best regards!

gudeqing avatar Aug 26 '20 08:08 gudeqing