disable all filters but --trim_poly_g

[jazberna1]

Hey OpenGene team,

I am using fastp to trim polyG in NextSeq reads. That is the only filtering I am interested at this point. I am wondering if with these settings below I am effectively just trimming polyG of if fastp is doing some additional filtering.

fastp \ 
--in1 R1.fastq.gz --out1 R1.no_polyg.fastq.gz \
--in2 R2.fastq.gz --out2 R2.no_polyg.fastq.gz \
--disable_quality_filtering \
--disable_length_filtering \
--disable_adapter_trimming \
--trim_poly_g \
--n_base_limit 50 \
--html report.remove_polyg.html

Many thanks Jorge