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Filter per tile sequence quality

Open gubrins opened this issue 3 years ago • 1 comments

Heys! I'm working with whole-genome sequencing of a non-model organism and I was checking the quality of the data with FastQC. As I found that my per tile sequence quality was bad, I started looking for other softwares to filter my data. That's when I found fastp, and now I'm filtering all my data with your software. However, as I obtained a failure with FastQC in the tile's section and fastp does not provide (as far as I know) any information about it, I reran FastQC after running fastp on my data and the tile's failure was still there. How could I filter by tiles with Fastp?

Thanks, Gabriel

gubrins avatar Dec 01 '20 15:12 gubrins

@sfchen 相同的需求,一年半以后仍然存在!陈博士可否考虑规划一下这个功能?

wangshun1121 avatar Jun 22 '22 03:06 wangshun1121