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Could you add an option to trimming polyT from the 5'?

Open haibol2016 opened this issue 4 years ago • 1 comments

Hello, Could you add an option to trimming polyT from the 5'? I think it is useful for filtering polyT stretches coming from polyA tails in unstranded RNA-seq data.

Thanks,

Haibo

haibol2016 avatar Nov 01 '20 03:11 haibol2016

Hello,

I think you can try to filter these reads by the parameter, --low_complexity_filter.

Ann-Holmes avatar May 31 '21 08:05 Ann-Holmes