No fusion found in tests data

[shikharoy123]

amar@amar-Virtual-Machine:~/GeneFuse$ ./genefuse -1 testdata/R1.fq -2 testdata/R2.fq -r Homo_sapiens_assembly19.fasta -f genes/cancer.hg19.csv 22:53:5 start with 4 threads 22:53:9 mapper indexing done 22:53:9 sequence number before filtering: 0 22:53:9 removeByComplexity: 0 22:53:9 removeByDistance: 0 22:53:9 removeIndels: 0 22:53:25 matcher indexing done 22:53:25 removeAlignables: 0 22:53:25 found 0 fusions

./genefuse -1 testdata/R1.fq -2 testdata/R2.fq -r Homo_sapiens_assembly19.fasta -f genes/cancer.hg19.csv

genefuse v0.3.0, time used: 20 seconds

22:53:25 done No fusion gene found in test data.Kindly reply....

[sfchen]

I have updated the demo dataset, which contains a valid EML4-ALK fusion with ultra-high frequency.

Please download it again from: http://opengene.org/dataset.html