Joey

How to conduct footprint analysis for loci of a single gene across different celltypes

1

Current analysis pipelines only include celltypewise footprinting analysis. However, if the object is to investigate how a single gene is regulated during some import biological process, there's no accessible codes...

How to investigate specific gene target using ArchR?

1

So far, all the vignettes have been focused on cluster-scale analysis, but all can we use ArchR to investigate the regulation mechanism for one gene. For instance, I want to...

No speed increase was observed when use_gpu=True

1

The time consumption by the model.fit step seems almost the same with or without using gpu. What's going on here?