NeuralBind

I have a similar issue, i just started using seurat i try now with merge and then integrate with DataIntegration, while the vignettes in the LayerIntegration are making distinct layers...

Well, if you SCTransform each individual dataset and then merge it shouldnt have the same output as if you SCT all your datasets together. You have different data input when...

Well i first tried it couple day ago, i merged two SCT transformed datasets (it kept the each single layer SCT$count1, SCT$count2 etc.), but by the time you run SCT...