Nathan Molinier

> I wrote [this function](https://github.com/ivadomed/utilities/blob/main/dataset_conversion/utils_dataset_conversion.py#L35-L40) fetching individual BIDS entities using regular expressions based on their keys (e.g., `sub-`, `ses-`). The function can be extended to any other entities, and its...

Hey @valosekj ! This new naming version is indeed better ! Also, I would like to add a small comment: I see that you are using the suffix `_dseg` because...

Maybe we should wait before merging this PR we are completely updating the filenames and tree with @sandrinebedard in https://github.com/spine-generic/data-multi-subject/pull/176

Agree with this proposal ! Also, from a more technical standpoint, to follow our conventions, the entity `space-other` should be added to the filename as well as a JSON sidecar...

Yes we should do that also

> We should also add the `space-other` field #156 Or `space-warp` but we need to add this to the JSON sidecar as well to say that the image was warped...

> I noticed that the disc labels in the derivatives are in the original space LPI, should I reorient them and add `space-other` to be consitent? or do we keep...

@sandrinebedard it seems that the problem is different actually. The two files with and without the suffix `_softseg` are present in the derivatives folders and they both represent soft segmentations...

Should be merged only after https://github.com/spine-generic/data-multi-subject/pull/170, I figured that some manual segmentations of the canal already exist.

More accurate segmentations will be added by https://github.com/spine-generic/data-multi-subject/pull/185