bgcflow

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This PR prepare the official release of BGCFlow version 1.0.0 Checklist: - [ ] Bump version - [x] Update citations - [ ] Add funding bodies icon to the report

matinnuhamunada

The command `bgcflow build database` fails when there are multiple antiSMASH versions in the `data_warehouse`. This is because dbt will fetch all parquet of the different versions and then fail...

matinnuhamunada

Run fails on Antismash "pip is looking at multiple versions of antismash to determine which version is compatible with other requirements."

1

While the dry-run works perfectly fine, once I do the normal run to perfom on the example dataset, I receive the following error: `Building DAG of jobs... Your conda installation...

artfet

bgcflow integration with panalleleome

5

anpanche

ChatBGC

3

The upcoming metabase version 47 will have an embedded chatGPT feature. Looking forward to it :) - https://discourse.metabase.com/t/a-chat-interface-within-metabase-powered-by-chatgpt-api/24220 Will be something like this? - https://www.reddit.com/r/ChatGPT/comments/12onuhm/i_used_the_gpt4_chat_api_to_generate_sql_right/

matinnuhamunada

Some of the genome ids are wrong in this table: https://nbchub.github.io/bgcflow_report_demo/arts/

matinnuhamunada

matinnuhamunada

Need to create a guide to run BGCFlow on clusters such as LSF or SLURM

matinnuhamunada

Follow this example to set which jobs should be run locally and which can be run in a cluster https://github.com/Snakemake-Profiles/slurm/issues/45

matinnuhamunada

It seems the offline mode for GTDB has not work as intended.

matinnuhamunada