drep icon indicating copy to clipboard operation
drep copied to clipboard

Rapid comparison and dereplication of genomes

Results 28 drep issues
Sort by recently updated
recently updated
newest added

My MAGs have 71,000 bins. it too many~ when i run dRep dereplicate drep/ -g test/*.fa -sa 0.95 -nc 0.30 -p 256 -pa 0.9 -cm larger it error dRep: Argument...

Version (Anaconda): drep 3.5.0 pyhdfd78af_0 bioconda First of all, thanks for your work, dRep has been very useful in my work. One thing that could be improved is the use...

enhancement

Hi, I've recently tried to run dRep and have repeatedly commided error with the message '!!! checkM failed !!!' By looking into the log I think it looks like the...

Hello, I made a dockerfile for drep. The only dependency that I wasn't able to find was ANIcalculator. If you can refer me to some repository that holds gANI or...

Hi! This is very minor but I was just wondering how the latest release on the repo is v3.4.2 but a mamba install with no version specified gave me v3.5.0....

pass cli threads parameter down to mash sketch

Hi, Thanks for the tool. I am wondering if you are planning on creating a singularity image for the tool? Best regards, Joao