Mitmischer
Mitmischer
Hello, Consider the following SHACL: ``` neo4j:SomeShape a sh:NodeShape ; sh:targetClass neo4j:Some ; sh:property [ sh:path neo4j:name ; sh:minCount 1 ; sh:severity sh:Critical ; sh:message "Some is missing a name!"...
First of all, thank you for the great package! I have the following use case and wonder if it's already implemented or if it's missing from Yamale. ``` a: mode:...
**Is your feature request related to a problem? Please describe.** I have a set of genes and I want to filter the gff accordingly. agat_sp_filter_feature_by_attribute_value.pl only handles single comparisons so...
**Which SIST2 component is your Feature Request related to?** web **Is your feature request related to a problem? Please describe.** I like the way media types can be filtered (with...
Hello, I'm opening this issue here, but it might just as well be opened at the r-argparse-repo. New users might need guidance on when to use r-argparse or r-optparse. It...
Hello, the gene in question is ENSG00000006062. I can retrieve its full sequence fine, but I cannot retrieve upstream of it (for whatever reason). The error I get from the...
Hello, I have a couple of genes that I want to get the sequence of. I am using the following code for this: ``` library(biomaRt) genelist=c( "ENSG00000002549", "ENSG00000004468", "ENSG00000005059", "ENSG00000006062",...
**Describe the bug** In order to perform differential enrichment, I wanted to try on a single gene, but gimme crashes. **To Reproduce** Steps to reproduce the behavior: ``` gimme maelstrom...
**Describe the bug** `gimme scan` appears to be incompatible with custom PWMs that have spaces in the motif description. Note that JASPAR itself returns files that are formatted like this,...
**Describe the bug** I'm currently preparing a motif enrichment analysis. Preliminarily, I wanted to test the enrichment on just a single gene, but the program terminates prematurely. **To Reproduce** Steps...