MigRibe

Yes, PeptideShaker is stuck at “Importing PSMs from glutenmgf.comet.pep.xml.gz”. Bug log in appendix. Many thanks Enviado do Correio para Windows De: Harald ***@***.***> Enviado: 15 de novembro de 2022 16:42...

Of course. Many thanks. Enviado do Correio para Windows De: Harald ***@***.***> Enviado: 15 de novembro de 2022 21:48 Para: ***@***.***> Cc: José Miguel Silva Ferreira ***@***.***>; ***@***.***> Assunto: Re:...

[searchgui_out.zip](https://github.com/compomics/peptide-shaker/files/10023057/searchgui_out.zip)

Hi, Link with raw file and fasta. Thanks https://we.tl/t-9f50pFS7Lf Enviado do Correio para Windows De: Harald ***@***.***> Enviado: 16 de novembro de 2022 20:20 Para: ***@***.***> Cc: José Miguel Silva...

https://we.tl/t-Jc3VXihQPr Many thanks

Dear Harald, Thanks for your email. I will try with other java version as soon as possible, and I will give you my feedback. Yes, I am aware, but I...

Dear Harald, I followed your advice and I managed to get to the end of the peptideshaker analysis using the comet. Many thanks! As for Amanda, it seems to have...

Dear Harald Many thanks for your reply. https://we.tl/t-fgazVhaiAE Also, I tried a search on another computer, but the step to open peptideshaker fails. And I can't open the file manually....

Thanks for your reply! Yes, it looks like amanda gets stuck on a specific step. If I can't fix the situation maybe I'll get in touch with the amanda developers....

Yes, I've tried that, but I can't open the file. Here are the files, please give me your feedback on what might be happening. https://we.tl/t-vIRghEVjRJ Enviado do Correio para Windows...