Jiaying Yang

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icon company Sun Yat-sen University icon location Shenzhen, Guangdong, China

Results 3 issues of Jiaying Yang

The exact meanings of "Target_Chain" and "regression label"

Hi, great work! In the PDB2020/train.csv, most of the "Target_Chain" s are "AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA". What do they mean? Additionally, does the regression label represent a Kd or Ki value? How can...

Input format of ligand

1 comment

Besides the SMILES format, are there other input formats that can be used for ligand input to predict interactions with proteins? The SMILES format is difficult to convert and prone...

Affinity values with different trends

2 comment

Excellent work on Boltz2 - it's truly impressive and highly valuable for glycan-protein interaction studies! I'm currently using the model to predict glycan-protein affinities and have a question about output...