MesYosra

Results empty funannotate annotate

3

Hello, I ran funannotate annotate with the command : funannotate annotate --gff "/shared/home/ymestiri/projects/annotation_fusarium/Funannotate/UK0001Mo.gff3" --fasta "/shared/home/ymestiri/projects/annotation_fusarium/Funannotate/UK0001. fasta" --header_length "10000" -d " /shared/home/ymestiri/projects/annotation_fusarium/Funannotate/FUNANNOTATE_DB" --species "Fusarium oxysporum " --cpus 10 -o "/shared/home/ymestiri/projects/annotation_fusarium/Funannotate/annoted/". I...

Problem with "gff3_ID_generator.py"

8

Hello, So I have a gff3 file where there are lines missing ID (column 9). Those lines mainly concerns CDS' and stop codons. I tried to use "gff3_ID_generator.py" with the...