Maryam-Haghani

> OK, I think it was a bug. Thanks for reporting this. > > By the way, `taxid:11108` has no children. Yeah 11108 has no children, but considering the result...

> Thanks for reporting this. > > It was designed to avoid repeatedly outputting (already outputted) subtrees. > > 1. Marking taxa as visited: https://github.com/shenwei356/taxonkit/blob/master/taxonkit/cmd/list.go#L294 > > 2. Skip marked...

> > Yeah 11108 has no children, but considering the result formatting for the list method, it should return just itself as the result. > > Yes, it did. >...

> > Yeah 11108 has no children, but considering the result formatting for the list method, it should return just itself as the result. > > I've fixed it, did...

Thank you for your helpful answer @dvklopfenstein. As far as I see, you have downloaded the gpad file in [your notebook](https://github.com/tanghaibao/goatools/blob/main/notebooks/annotations_gpad_file.ipynb) from [GO website](http://current.geneontology.org/annotations/goa_human.gpad.gz) that is **gpa-version: 1.2** and using...

You are welcome! BTW, I used [evidenceontology](https://raw.githubusercontent.com/evidenceontology/evidenceontology/master/gaf-eco-mapping-derived.txt) to have the updated ECO codes and have written a code to convert this file to a dictionary automatically. This code can be...

And thanks for your valuable work.