Maosihong

 please help me I run with command like:smoove call --name ptre --fasta /pub_storage1/data/ref/Potra02_genome.fasta -p 1 --outdir /usr_storage/lsy/smmove/results-smoove -p 1 --genotype /pub_storage1/data/bam/ptre/SRR2751102.bam

always get mistaken chain connection in binder design

5

 here shows the partial comparison between original stucture and the one after diffusion. confusingly, i always get wrong connection within those part that i did not declare to be...

why there is no example for design binder for protein complex

3

I got error with paras like this, i wonder if it is a incompatible problem that i try to design binder for more than one molecule? ['contigmap.contigs=[C/0 F/0 100-120]', 'ppi.hotspot_res=[C80,C82,C86,C87,C90,C92,C93,E128,C138,C185,C187]',...

There seems to be some bugs in the scripts l_sort.py&l_merge.py

2

Actually, these two scripts both are not python2/3 compatible: l_sort.py use the code line as "sort(cmp = )" however the cmp para is already canceled in python3(at least it's not...

hi patrick, i'm now working on a project using RIF strategy, i believe this repository would help me a lot. but im now facing a problem at the very beginning:...