Marie-Charlotte Dumargne

Installation issue on apple M2

3

Hi I was unfortunately unsuccessful with the installation. Could you please help me with this? Here are the outputs: `conda install -c bioconda vcf2tsvpy` ``` Channels: - bioconda - conda-forge...

Add multiple BAM files with modification tags

8

Hi, I am a newbie. Could you please help me ? Many thanks! **Describe the bug** I do not know how to work with multiple modbam files (generated with dorado)...

Single sites analysis - too many significant sites and FDR correction

3

Hello @ArtRand Thank you for such a nice package. I ran this for my analysis (ignoring positions with low valid coverage ( reading reference FASTA at "/Users/MC/Downloads/ncbi_dataset/ncbi_dataset/data/GCA_000001405.29/GCA_000001405.29_GRCh38.p14_genomic.fna" > running single-site...

Does NanoMethViz work with human T2T data?

4

Hi @Shians, I was wondering how to make an `exon_tibble` object for the T2T-CHM13v2.0 genome? I would be grateful if you could help, thanks!