Manuel
Manuel
Hi, sorry to hear that this does not work for you. I tried to reproduce your issue and it worked for most of the spectra I was testing, however I...
Hi, I think I found the reason and solution for this problem, you can check it out here #244 . As soon as I checked for possible side effect and...
Hi @backertix , Could you check if `'TIC'` is present in `run.info['offset_dict']`? If yes I'd need the file or the Chromatogram element from your file to debug this. If its...
Hi @backertix, Could you upload a sample of the mzML file? Just the chromatogram element would probably be enough, you can also remove the binary data if necessary. I'll have...
Hi, Thanks for reporting this, I'll have a look as soon as I can! Could you tell me which obo version you are using? Best, Manuel
Hi Jonas, Accessing the information using BeautifulSoup is of course not optimal .. Do you want to access all the cvParams in fileDescription? Currently, all params in the spectrum elements...
Hi @arabidopsis, Thanks for reporting this. The reinitialization was implemented due to a user request after some internal discussion. But you are right, reindexing the whole thing after iterating does...
Love to see this too. Currently, using mzMLs from timsTOF instrument leads to reading in the files (I'm using 4) and it starts crashing after consuming all my RAM (48GB)...
Should be solved with #307 We still reset the iterator, but there is no reindexing performed after reset. If you think your issue was not addressed as it should be,...
Hi @rxnataliezhang, You can get the scan window for an MS1 spectrum by: ``` ms1_spec["scan window lower limit"] ``` If you want to know the isolation offset for precursor selection...