Luna van der Loos

Different output multiple samples (with for loop) and single sample

5

Hi, I have been using NGSpeciesID on a microbiome dataset with 90 samples (one fastq file per sample). I use a for loop to loop through these samples with the...

Customize sample order heat_tree_matrix?

5

Hi, I am comparing abundance between 5 different salinity ranges (0-10, 10-15, 15-20, 20-25, and 25-36). I am making a heattree with heat_tree_matrix() as follows: ``` obj %>% metacoder::filter_taxa(taxon_ranks ==...