Lu Lu

icon indicating an email [email protected]

icon location Ann Arbor icon location Bioinformatics PhD student @welch-lab @umich

Results 5 comments of Lu Lu

Writing r+ backed adata causes error in raw

Hi, I have the same issue while I am trying to save a raw version of adata which is on backed mode. I guess the .raw() method doesn't support storing...

AttributeError: 'Liger' object has no attribute 'var_genes'

I think the issue is because we save a copy of HVGs during select_genes which will be used as a reference during the scale_not_center step. Can you try assigning your...

Errors When running netAnalysis_signalingRole_heatmap

I met the same issue. Did you subset the CellChat object before running this code?

Non-zero exit status when trying to install CellChat from Github

I met the same issue as @gchen605. Are any solutions being found? Thanks!

Non-zero exit status when trying to install CellChat from Github

> I met the same issue as @gchen605. Are any solutions being found? Thanks! Reinstalling xcode solved the issue for me.