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                                            LuciaJim

Loading RNA and integrated assays with as.cell_data_set()

Hi! I've realized that I had not provided “monocle3_clusters” and “monocle3_partitions” info as it's explained in R Documentation: **Clustering information is transferred over in the following manner: if cell-level metadata...

GFF3 to GTF: How to preserve gene features in GTF output

> It's a pain that the majority of RNAseq programs still work with GTF files as output. As you mentioned Cufflinks outputs always a transcript GTF and you've no choice...