LouisK92
LouisK92
Thanks! I was trying the cloning and reinstalling. However, as I use the `danielunyi42/segger_dev:cuda121` docker container I ran into the issue ``` ERROR: Package 'segger' requires a different Python: 3.10.12...
For testing I tried to run the code with the latest segger installed from git (leaving out my `spatialdata` data prep). I still ran into the same `CUDARuntimeError`
For running the large scale benchmark gpus are available on my side. I am just limited on the development and testing side as the [openproblems](https://openproblems.bio) GitHub action tests only run...
A quick workaround (assuming that cell labels don't overlap) would be the following. Note that I used circles instead of points for the example, which is closer to what I...