Brutenis Gliwa

Hello Anne! Yes, it segments the bronchopulmonary segments, but you need the mask for this. The original DICOM data set is not necessary. The mask is essentially a 3D numpy...

You can use the script `airway-pipeline.py` for all the stages, like this: `python3 airway-pipeline.py model`. This will create stage 1 for you. But you first have to create the defaults,...

> First: If my mask does not segment the lung lobes, bronchus, arteries, and veins like the mask in your project, but only extracts the bronchus (that is, the bronchus...

> I printed out my compressed mask array, and the result showed that the value of most positions is "false", a few positions are "true", not "0" and "1". Is...

> I put the model.npz file into a folder, compressed it into a zip format and uploaded it, you can see if it can be decompressed normally, and use The...

It works for me without errors (even stage-04). I've included a rendered version of your model:  Although the 0th axis was flipped (i.e. it was upside-down), I flipped it...

You could also try setting `force: True` in the defaults.yaml.

Folder structure looks exactly how it should. But I can't seem to replicate the error with your model on my part, it works even without flipping and without converting it...

Yes, the problem is that the data does not have enough detail. I had previously attached an image of your 3D model, it lacks the actual segments which should be...

I've emailed the doctor who gave us the data whether I'm allowed to send to it to anyone, but he told me I should not, at least for now. Maybe...