Lars Doorenbos

Thank you for your help @GodloveD! I am indeed running the run_singularity.sh script. I do have some follow-up questions. What about the environment configuration could be incompatible with the bind-mounts?...

I manually added the /storage folder to the orbit.sif folder, now it gives the same error with another mount: ``` (run_singularity.py): Called on compute node with arguments WARNING: nv files...

@pascal-roth Yes, the `logs` directory exists in the cluster Orbit directory.

In the line mentioned by @AutonomousHansen, this `logs` directory is mounted to `/workspace/orbit/logs`, but adding `ls /workspace` to the run script gives `ls: cannot access /workspace: No such file or...

Removing the `-B $CLUSTER_ORBIT_DIR/logs:/workspace/orbit/logs:rw \` line still gives the same error.

Manually adding the /storage folder to the orbit.sif folder does work, but now it gives an error with another folder: ``` (run_singularity.py): Called on compute node with arguments WARNING: nv...

`apptainer version 1.1.3-1.el7`. Maybe I should ask for an update ;)

For now, we found a different machine on which to run Orbit. Thanks anyway!

No, unfortunately I have not been able to solve this.

I am also interested in using multiple images for a single response. Could you expand upon how this works under the hood? Does it just concatenate the input images in...