Michael Landi

Hey @yilunhuangyue this is really perfect! has this been further developed for bigger genomes? or eukaryotes?

Hey, @cjain7 thanks for the response. I have however tried to use this tool yesterday on a 650Mb two haplotypes of roughly the same. I tried to adjust --fragLen 50000....

@YinLiLin on the one axis

@YinLiLin or even what flag should I use to have separate axis top and bottom

 more specifically here is a screen shot

I am using AUGUSTUS (3.4.0). The augustus species folder is created ..../predict_misc/ab_initio_parameters/augustus. This folder for now has: extinisic/ model/ profile/ species - no parameters folder

Okay great! I am re-running the step. I will get back to you. The upgrade is done

previous error solved ."Manihot" is my species

 Sorry, when I replied it was midnight. here is the list of mahihot directory

@nextgenusfs thanks for this!! Did you manage testing v3.4?