Lafmas

Hi again ``` WARN: Graphviz is required to render the execution DAG in the given format -- See http://www.graphviz.org for more info. ``` this issue was solved when I installed...

Dear @andrewprzh Thank you for your reply. Warning for `graphviz` already solved. How can I ignore the warning about single-end? Insert `nextflow run metaGT -profile test --params.schema_ignore_params = "single_end"` command...

Dear @andrewprzh Thank you! I will try a test analysis. Best, Lafmas

Dear @andrewprzh Unfortunately, the error we previously discussed still exists. I have attached a screenshot of my terminal to give you a clearer picture. It seems minimap2 and prokka still...

Dear @andrewprzh Sure. I will try it. As soon as the results are confirmed, I will share them here Best Lafmas

Dear @andrewprzh I deleted the existing conda environment and installed Nextflow & metaGT newly again. Afterward, I am running the test file and this time the process seems to be...

Dear @andrewprzh Unfortunately, the process was stopped. I have attached screenshot of the error. And I'll see if there are any problems with my conda environment. Best Lafmas