Layla Freeborn

I'm getting the same error from bonito train. I installed the latest version of bonito: ``` pip install --upgrade pip pip install -f https://download.pytorch.org/whl/torch_stable.html ont-bonito-cuda113 bonito --version bonito 0.5.1 ```...

Our team is having this same issue. NanoFilt outputs a trimmed read but the logfile is nowhere to be seen. NanoFilt --logfile full/path/to/cwd/trim_1.log --quality 10 SRR12142658.fastq > SRR12142658_trimmed1.fastq ` Are...

> Which NanoFilt version are you running? 2.8.0; installed with conda