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Is phate in Seurat v5?

Open htejedam opened this issue 1 year ago • 0 comments

I recently upgraded to Seurat 5 and I see that the previous command for reinstating PHATE in Seurat is not working. This is not big issue, since I still can run phate with just phateR::phate but I do get a "very different" dimension reduction output than the one from Seurat::RunPhate even with the same parameters.

htejedam avatar Dec 04 '23 13:12 htejedam