KarlKaise

While executing SCTK pipeline (using the newest docker image, see : https://sctk.bu.edu/app/SingleCellTK), I encountered following issue trying to plot different UMAP visualizations. UMAP Complete Warning in geom2trace.default(dots[[1L]][[1L]], dots[[2L]][[1L]], dots[[3L]][[1L]]) :...

.yml env installation failure due to pip problems

1

Hello when I try to install the package using .yml file from git clone directory I get following error: Looking for: ['python=3.8', 'pip', 'scanpy'] Transaction Prefix: Updating specs: - python=3.8...