Johannes Wiesner

Implement reordering function to assess feature significance?

7

In their [paper from 2018](https://www.nature.com/articles/s41467-018-05317-y#Sec9), Xia et a. implemented a method to match canonical variates from resampled data sets to the original data set in order to be able to...

Add method to compute explained covariance

4

I know this is easy to compute, but still nice to have out-of-the-box: Wouldn't it make sense to also add a `compute_covariance` method to `_CCA_Base`? Like such: ```python def explained_variance(X,y,X_weights,y_weights):...

Return test value when using mlxtend.evaluate.permutation_test

5

Is there a reason why `mlxtend.evaluate.permutation_test` only outputs a p-value but no test value? If no, it would be nice, if this could be implemented.

Hi, thanks a lot for keeping up the good work! Just wondering if Chi2Indepence is implemented? If not, feel free to use my code: https://github.com/JohannesWiesner/statplot/blob/master/statplot.py Greetings, Johannes

Allow user to obtain mouse coordinates

2

It would be nice if it was possible to obtain mouse coordinates from `dash_cytoscape.Cytoscape`. In my current project, I would like to create new nodes whenever I click on 'white...

Add option to install CAT12

8

Recently, A [CAT12 interface was added to nipype](https://github.com/nipy/nipype/pull/3310) by @mfmachado. This interface was tested using a bare-metal installation of SPM and CAT12. Furthermore, @m-wierzba has already [created a singularity image](https://github.com/m-wierzba/cat-container)...

curl: (60) SSL certificate problem: unable to get local issuer certificate

6

I created a bash script to run [this SPM12 example from Neurodocker](https://github.com/ReproNim/neurodocker/tree/master/examples#spm12). When trying to to build the resulting Dockerfile using `docker build .`, I am apparently running into a...

How is MCR version chosen based on SPM12

4

I installed SPM12 (v7771) using `--spm12 version=r7771`. [In the README](https://github.com/ReproNim/neurodocker#supported-software ) it says _"Note: Matlab Compiler Runtime is installed when SPM12 is installed."_ but which MCR version is installed given...

datalad create returns git-annex SQLite3 Error

10

### What is the problem? When trying to create a dataset on a windows-based filesystem using a Linux OS, I get the following error: ``` [INFO ] Detected a filesystem...

traits.trait_errors.TraitError using SpecifySPMModel

5

### Summary When using `nipype.algorithms.modelgen.SpecifySPMModel`, the respective node-folder contains empty files (0 KB) and therefore raises an `traits.trait_errors.TraitError` ### Actual behavior I set up a workflow using the HCP dataset,...