JinDJsuper

> [Here's](https://gist.github.com/ntustison/12a656a5fc2f6f9c4494c88dc09c5621#deformation-based-morphometry) how you can do that group, voxelwise analysis in ANTsR. If you want to quantify these values in different brain regions, you'd need a way to parcellate the...

> Yes, all those commands are also available in ANTsR. Take a look at the tutorial I linked to above and scroll through some of the commands in ANTsR. If...

> You're not going to be able to use the ANTsRNet stuff as it was trained on human data. Thank you for the response; I understand now. Is it still...

> `antsCorticalThickness` was developed in the context of human data and it might not generalize cleanly to other species. Given your application, you'll probably need to decompose the pipeline into...

I really appreciate your suggestions and the methods you provided. I'm a bit of a beginner in this area, so I'm having trouble understanding the correct usage of your script...

thank you very much， i try this code,and maybe not some changs for my image. I think there might be some issues with the commands.This is my command： bash /home/jindj/download/minc-toolkit-extras-master/antsRegistration_affine_SyN.sh...

hi： thank you very much for your help this is my command and its image is No.1 and No .2 is case image bash /home/jindj/download/minc-toolkit-extras-master/antsRegistration_affine_SyN.sh --syn-control 0.25,3,0 dogbrain46_brain.nii.gz begle_Deformable_template0_rigid.nii.gzWarped.nii.gz testCC3_0.25_...