Jiangjiangzhang6
Jiangjiangzhang6
have you solve this error , I GOT the sam it show the error of key but it could run and down in single command ,but its error when run...
Dear my friend, I run the command "gmes_petap.pl --ET hints.gff --et_score 10 --sequence ../../../index/hap1.last_w200.final.fasta", sadly, it always show the error on when it use the "probuild " . Thank you
the command was “ funannotate update -f genome.fasta -g update.gff3 --species cannabis-sativa -o ~/dama/annotation/hap2/evm/update --pacbio_isoseq ../../../index/RNA/hemp_iso_seq.fasta --max_intronlen 50000 --aligners minimap2 ” and its error ------------------------------------------------------- [Aug 30 10:07 PM]: OS:...
and then install the "pigz" and "signalp"; and the pigz was in the dirctionary funannotate/bin. but it also show "ERROR: pigz not installed ERROR: signalp not installed" and the re-run...
when I run the " funannotate annotate --rename "cannabis" --gff update.gff3 -o 11.gff3 --fasta genome.fasta -s cannabis" its down but when I run agin the "funannotate update -f genome.fasta -g...
> Hi @Jiangjiangzhang6 , > > Could you please run the diamond command (the one in yellow, run it outside of emapper) and report back about the error? > >...
> Did it finish? Also, if possible use the exact same parameters as in the yellow line from above, please. I see that now you are using nr DB instead....
> Could it be that it is not the same diamond version the one that is running? What is the output of `diamond --version` and `/public/home/zhaoli/software/diamond-master/bin/diamond --version`? What is the...
> thank you for your reply , I also didnot the error ,but when I submit the command to the Cluster, not its running , its lsf , didnot know...