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                                            Feiyang Zhang

Could not find index file but still generated the loom from bam -- run10x error?

Hello, I'm facing the exactly the same warning. > [E::idx_find_and_load] Could not retrieve index file for '/home/***/FC_IL_1.bam' 2022-03-16 07:11:40,926 - DEBUG - End of file. Reset index: start scanning from...

Could not find index file but still generated the loom from bam -- run10x error?

> No idea either lol. Please would you mind letting us know here if you find out something about this? Thanks @JerryZhang-1222 Hello, I ignored this warning and finished the...

Running velocyto on multiple samples with 10X

> @chlee-tabin @Puriney > > This is what I did, It would be great if a contributor can comment to confirm. > > ``` > ldat_obj.1 obj.1 . > ....

TypeError when Running CLEAR: 'NoneType' object is not iterable

also, I have installed genePredToGtf but it still told me that "genePredToGtf is required for maximal isoform selection!". I'm quite confused. Thanks!