Jens-Uwe Ulrich

Results 16 issues of Jens-Uwe Ulrich

## Question Hi Seqan-Team, I just recently read about XOR Filters and that they were superior to Bloom Filters in regards to memory usage and query time. Do you plan...

feature/proposal

## Platform - SeqAn version: 3.0.0 - Operating system: Ubuntu LTS 18.04 - Compiler: GCC-7.4.0 ## Question I would like to add Seqan3 as an external project to the cmake...

question

According to Daniel Lemire, exception handling is quite expensive ([https://lemire.me/blog/2022/05/13/avoid-exception-throwing-in-performance-sensitive-code/#comments](https://lemire.me/blog/2022/05/13/avoid-exception-throwing-in-performance-sensitive-code/#comments)). Thus, we should clean the code and avoid exceptions in all cases except reading and writing files.

enhancement

exchange IBF with hierarchical IBF

enhancement

add support for basecalling with [Dorado](https://github.com/nanoporetech/dorado)

enhancement

Use minimum number of signals instead of minimum required read length => avoids basecalling of too small signal chunks and reduces basecalling errors

enhancement

Move from seqan2 to seqan3

enhancement

Wait with receiving signals and classification until MUX scan has finished

bug

Log messages should pop up in message window of MinKNOW

enhancement