Jeewan-Thapa

Thank you very much Bjerling Taul. I tried the scripts and got following message. Had you also encountered such issue? How did you solve it? 

Thanks @apetkau, No I haven't. Do I need to set-up bioconda channel and then again reinstall snippy?

@apetkau It looks like something went wrong or am I missing something. Thank you. 

@apetkau It looks like the snippy has been correctly installed in a snippy environment. When I run the snippy, do I have to always run in the snippy environment, and...

Thank you very much for your kind explanation. I noticed that snpeff is still not upgraded even after using the above update script. Even after reinstalling by "conda install -c...

@apetkau I am very sorry to trouble you again. I am not able to upgrade to snpEff version >=4.3. Do you have idea how to do it. @BjoerlingTaul Did you...