JaykishanJ

Results 2 issues of JaykishanJ

Is it possible to get CpG, CHG, and CHH from MEDiP seq data

i have MEDiP seq data and alignment file with both bwa as well as soap aligner is there a way to get CpG, CHG, and CHH enrichment from this data...

RNASPades

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### Description of bug spades-core: /spades/assembler/src/common/utils/kmer_mph/kmer_index_builder.hpp:297: size_t kmers::KMerDiskCounter::MergeKMers(const string&, const string&) [with Seq = RuntimeSeq; traits = kmer> == Error == system call for: "['/nfsdata/data/007_Softwares/SPAdes_3p15p4_Linux/bin/spades-core', '/nfsdata/new_project/denovo_RNASPAdes/out_combine_5-7> None ### spades.log [spades.log](https://github.com/ablab/spades/files/13898518/spades.log)...