Jaoquien

Albacore + Porechop VS Guppy + Deepbinner

2

Hi everyone, Until recently we used to apply Porechop after Albacore basecalling+demultiplexing. Now, we are using Guppy to basecall and we decided to apply Deepbinner to demultiplex. My main question...

Finding overlaps with minimap... Killed

15

Hi, I have ONT an Illumina reads from a NCTC _Staphylococcus aureus_ strain. I've been able to: - Perform Canu assembly with ONT reads - Perform hybrid unicycler assembly with...

Killed trimming process

4

Hi everyone, I usually apply Porechop after Albacore Basecalling. `porechop -i ./albacore/ -b ./porechop/` Now I am working with a run where 12 _Staphylococcus pseudintermedius_ strains were sequenced with Rapid...