Jannes Spangenberg

diffmod.table missing majority of positions

5

Dear xpore developers, I ran xpore on two SARS-CoV-2 samples to compare variant differences. After running xpore dataprep and then xpore diffmod I only receive information for about 2500 out...

No pod5 conda package

16

Dear pod5 developers, please consider to create a conda package for pod5. I tried to create a pod5 recipe from the `pypi pod5` package myself using `grayskull`, but it fails:...

# Added Conda Recipes ## lib-pod5 recipe [Conda package](https://anaconda.org/jannessp/lib-pod5) - used wheel files to build conda package - I think better way would be to use source distributions or to...

Conda py-3.11 package

2

Dear @hasindu2008, can you build a conda package for python version 3.11 for pyslow5? Kind Regards, Jannes

Add lib-pod5

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Add lib-pod5 from [pod5-file-format](https://github.com/nanoporetech/pod5-file-format). ---- Please read the [guidelines for Bioconda recipes](https://bioconda.github.io/contributor/guidelines.html) before opening a pull request (PR). * If this PR adds or updates a recipe, use "Add" or...

dorado basecaller 0.9.5 RNA004 sup CUDA kernel error

2

# Issue Report ## Please describe the issue: - dorado basecaller v0.9.5 with [email protected] model takes very long to benchmarks RTX 2080 Ti - this behaviour did not occur for...