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Correlation between genes

Open maiskovich opened this issue 1 year ago • 2 comments

Hello,

I heard that Meringue was used to compute the correlation between genes in the Visium 10XGenomics public datasets posted on their website (https://www.10xgenomics.com/resources/datasets). Is that right? Is that information available somewhere?

Thank you

maiskovich avatar Jun 15 '23 20:06 maiskovich

Dear Matias,

Yes you heard correctly! Please check out our various tutorials including those working with Visium 10XGenomics public datasets here: https://jef.works/MERINGUE/

Hope that helps, Jean

JEFworks avatar Jun 16 '23 18:06 JEFworks

Thank you, are these cross-correlation summary statistics already determined & available to avoid redundant compute?

maiskovich avatar Jun 16 '23 21:06 maiskovich