Parralel Computing #2

[Acaro12]

Dear JEFworks team,

Thank you very much for the great package.

As described in https://github.com/JEFworks-Lab/MERINGUE/issues/15 , the first part of the pipeline to detect spatial patterns can be parallelized. Since the downstream steps such as filterSpatialPatterns and spatialCrossCorMatrix do not work genewise, I expect the mentioned block-wise processing of gene groups cannot be applied here. Could you think of another way to parallelize these downstream steps? I am currently working on a dataset with ~25.000 spots and 7.000 genes.

Thank you in advance, Best,

Christoph