Quentin Andres

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icon company Animal Genomics and Bioresources Research Unit (newer, PhD year 2-3) Center of Excellence in Aquatic Animal Health Management (older, PhD year 1) @ Kasetsart University icon location Bangkok, TH icon location Hello there, I am French, I enjoy molecular biology, and microbial genomics. I'm just a PhD student. If you want to work together or collaborate you're welcome

Results 5 issues of Quentin Andres

Concatinating CDS files for panEDTA

1 comment

Hello, Is it possible to use multiple CDS files from genbank and to combine them into a single file for panEDTA ? for instance cat cds_species1.fa cds_species2.fa cds_species3.fa > cds.fa...

question

How to treat the genomes which come from the same source? for instance if three samples are biological replicates.

2 comment

Hello, Thank you for making this useful tool, my question is the following, I would like to know, when i'm making a pangenome from diverse strains of Streptococcus iniae species,...

[No LINE, EDTA 2.2.0] Empty LINE file after RM2

Hi, I have tried to run EDTA at the latest version, in different ways on the HPC of my university however for each run the LINE folder is not EMPTY...

TandemMapper inputs --pacbio

Hi, Its only CLR for PacBio right? not HiFi? thanks

For the RepeatModeler step why throw logs to 2>null?

Hello, I would like to know why don't we store the log files in this step? Thank you.