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can strelka2 export variants in halplotype form?

Open ShannonDaddy opened this issue 6 years ago • 2 comments

Hi, strelka team

I was really impressed by the model and performance of strelka in calling somatic mutations. But I have a question on the variant form in the vcf file. Can strelka report MNPs, complex variants such as: --MNP-- chr1 100 AG GC --Complex-- chr7 200 TTTCA AT

Thanks!

ShannonDaddy avatar Jan 29 '18 12:01 ShannonDaddy