pyflow

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serajan

pyflow can hang on SMTP check, add a timeout to escape this case

1

As reported in strelka issue: https://github.com/Illumina/strelka/issues/80#issuecomment-444625718

ctsa

Python 3 support

4

Hi! This looks like a great library! I've been using pydoit and snakemake up to now. I noticed, that travis is configured to test only python 2.7. Are there any...

ajasja

Could it be added to PyPI so that installation can be done in one line (i.e. `sudo pip install pyflow`)?

DarioS

Per strelka ext4 discussion here: https://github.com/Illumina/strelka/issues/89

ctsa

Add cwd argument to addWorkflowTask

2

Currently, I can use "cwd" argument as shown in the cwd demo for "addTask", but it gives me an error "unexpected keyword argument" if I use it with "addWorkflowTask".

virajbdeshpande

Hi, I have a workflow that is dividing data into chunks and running workflowTasks on them. When there are too many workflowTasks, I am hitting the exception appended below. Using...

kcshashidhar

sub tasks with the same label blocking eachother

1

Hello, I was trying to debug this for a very long time.. It seems that if you have sub-tasks with the same label they will not run in parallel. For...

isthisthat

Help modifying startTasksFrom to support sub-WorkflowTasks

1

Pyflow has a nice option of starting from a particular task id when a workflow is run. eg, ``` python wf = SomeWorkflow() wf.run(startFromTasks='task_id') ``` Which works great as long...

hyjkim

Add option to cleanup pyflow.data directory after successful run completion

3

Hello, I'm trying to intall pyflow in my python 2.7.5 installation, using the command: ``` pip install pyflow ``` I get the following error: ``` ImportError: No module named ez_setup...

isthisthat